Thank you @anav for getting back to me.
Ops, sorry for not including the full config and network diagram (not sure how to do one, but if it would be helpful, I ll try drawing one).
I have tried adding and modifying the NAT rules as you recommended and got partly successful, the requests to my subdomains are just “spinning” in the browser trying now instead of just being “refused connection” as before. Although, still can’t reach them. Maybe I’m still missing something in source nat rule now 
Also, I am afraid I can’t rely on the fact that I have a static wanip, so I’d say it’s dynamic. Can you please refer me to how I can account for it?
Here is my full config export:
[leikoilja@MikroTik Hub] > export hide-sensitive
# may/16/2021 20:27:26 by RouterOS 6.47.8
# software id = 63WL-9G9C
#
# model = 2011UiAS-2HnD
# serial number = 467304B1DBAF
/caps-man channel
add control-channel-width=20mhz extension-channel=Ce frequency=2442 name=channel2G tx-power=13
add extension-channel=Ce frequency=5180 name=channel5G tx-power=13
/interface bridge
add admin-mac=4C:5E:0C:43:D6:3E auto-mac=no comment=defconf name=bridge
/interface wireless
# managed by CAPsMAN
# channel: 2442/20-Ce/gn(9dBm), SSID: The Apartment, CAPsMAN forwarding
set [ find default-name=wlan1 ] band=2ghz-b/g/n channel-width=20/40mhz-XX country=sweden distance=indoors installation=indoor mode=ap-bridge ssid="The Apartment" station-roaming=enabled wireless-protocol=802.11
/caps-man datapath
add bridge=bridge client-to-client-forwarding=yes name=datapath2G
add bridge=bridge client-to-client-forwarding=yes name=datapath5G
/caps-man security
add authentication-types=wpa-psk,wpa2-psk encryption=aes-ccm,tkip group-encryption=aes-ccm name="Security config 2G"
add authentication-types=wpa-psk,wpa2-psk encryption=aes-ccm,tkip group-encryption=aes-ccm name="Security config 5G"
/caps-man configuration
add channel=channel2G datapath=datapath2G mode=ap name=cfg2G rx-chains=0,1,2,3 security="Security config 2G" ssid="The Apartment" tx-chains=0,1,2,3
add channel=channel5G datapath=datapath5G mode=ap name=cfg5G rx-chains=0,1,2,3 security="Security config 5G" ssid="The Apartment-5G" tx-chains=0,1,2,3
/caps-man interface
add channel=channel5G configuration=cfg5G configuration.mode=ap datapath=datapath5G disabled=no mac-address=00:00:00:00:00:00 master-interface=none name=capsman radio-mac=00:00:00:00:00:00 radio-name="" security=\
"Security config 5G"
/interface list
add comment=defconf name=WAN
add comment=defconf name=LAN
/interface wireless security-profiles
set [ find default=yes ] authentication-types=wpa-psk,wpa2-psk mode=dynamic-keys supplicant-identity=MikroTik
/ip pool
add name=dhcp ranges=192.168.88.11-192.168.88.254
/ip dhcp-server
add address-pool=dhcp disabled=no interface=bridge lease-script="# DNS TTL to set for DNS entries\
\n:local dnsttl \"00:15:00\";\
\n\
\n###\
\n# Script entry point\
\n#\
\n# Expected environment variables:\
\n# leaseBound 1 = lease bound, 0 = lease removed\
\n# leaseServerName Name of DHCP server\
\n# leaseActIP IP address of DHCP client\
\n#leaseActMAC MAC address of DHCP client\
\n###\
\n\
\n# \"a.b.c.d\" -> \"a-b-c-d\" for IP addresses used as replacement for missing host names\
\n:local ip2Host do=\\\
\n{\
\n :local outStr\
\n :for i from=0 to=([:len \$inStr] - 1) do=\\\
\n {\
\n :local tmp [:pick \$inStr \$i];\
\n :if (\$tmp =\".\") do=\\\
\n {\
\n :set tmp \"-\"\
\n }\
\n :set outStr (\$outStr . \$tmp)\
\n }\
\n :return \$outStr\
\n}\
\n\
\n:local mapHostName do={\
\n# param: name\
\n# max length = 63\
\n# allowed chars a-z,0-9,-\
\n :local allowedChars \"abcdefghijklmnopqrstuvwxyz0123456789-\";\
\n :local numChars [:len \$name];\
\n :if (\$numChars > 63) do={:set numChars 63};\
\n :local result \"\";\
\n\
\n :for i from=0 to=(\$numChars - 1) do={\
\n :local char [:pick \$name \$i];\
\n :if ([:find \$allowedChars \$char] < 0) do={:set char \"-\"};\
\n :set result (\$result . \$char);\
\n }\
\n :return \$result;\
\n}\
\n\
\n:local lowerCase do={\
\n# param: entry\
\n :local lower \"abcdefghijklmnopqrstuvwxyz\";\
\n :local upper \"ABCDEFGHIJKLMNOPQRSTUVWXYZ\";\
\n :local result \"\";\
\n :for i from=0 to=([:len \$entry] - 1) do={\
\n :local char [:pick \$entry \$i];\
\n :local pos [:find \$upper \$char];\
\n :if (\$pos > -1) do={:set char [:pick \$lower \$pos]};\
\n :set result (\$result . \$char);\
\n }\
\n :return \$result;\
\n}\
\n\
\n:local token \"\$leaseServerName-\$leaseActMAC\";\
\n:local LogPrefix \"DHCP2DNS (\$leaseServerName)\"\
\n\
\n:if ( [ :len \$leaseActIP ] <= 0 ) do=\\\
\n{\
\n :log error \"\$LogPrefix: empty lease address\"\
\n :error \"empty lease address\"\
\n}\
\n\
\n:if ( \$leaseBound = 1 ) do=\\\
\n{\
\n # new DHCP lease added\
\n /ip dhcp-server\
\n #:local dnsttl [ get [ find name=\$leaseServerName ] lease-time ]\
\n network\
\n :local domain [ get [ find \$leaseActIP in address ] domain ]\
\n #:log info \"\$LogPrefix: DNS domain is \$domain\"\
\n\
\n :local hostname [/ip dhcp-server lease get [:pick [find mac-address=\$leaseActMAC and server=\$leaseServerName] 0] value-name=host-name]\
\n #:log info \"\$LogPrefix: DHCP hostname is \$hostname\"\
\n\
\n #Hostname cleanup\
\n :if ( [ :len \$hostname ] <= 0 ) do=\\\
\n {\
\n :set hostname [ \$ip2Host inStr=\$leaseActIP ]\
\n :log info \"\$LogPrefix: Empty hostname for '\$leaseActIP', using generated host name '\$hostname'\"\
\n }\
\n :set hostname [\$lowerCase entry=\$hostname]\
\n :set hostname [\$mapHostName name=\$hostname]\
\n #:log info \"\$LogPrefix: Clean hostname for FQDN is \$hostname\";\
\n\
\n :if ( [ :len \$domain ] <= 0 ) do=\\\
\n {\
\n :log warning \"\$LogPrefix: Empty domainname for '\$leaseActIP', cannot create static DNS name\"\
\n :error \"Empty domainname for '\$leaseActIP'\"\
\n }\
\n\
\n :local fqdn (\$hostname . \".\" . \$domain)\
\n #:log info \"\$LogPrefix: FQDN for DNS is \$fqdn\"\
\n\
\n :if ([/ip dhcp-server lease get [:pick [find mac-address=\$leaseActMAC and server=\$leaseServerName] 0] ]) do={\
\n # :log info message=\"\$LogPrefix: \$leaseActMAC -> \$hostname\"\
\n :do {\
\n /ip dns static add address=\$leaseActIP name=\$fqdn ttl=\$dnsttl comment=\$token;\
\n } on-error={:log error message=\"\$LogPrefix: Failure during dns registration of \$fqdn with \$leaseActIP\"}\
\n }\
\n\
\n} else={\
\n# DHCP lease removed\
\n /ip dns static remove [find comment=\$token];\
\n}" name=DhcpWithScript
/user group
set full policy=local,telnet,ssh,ftp,reboot,read,write,policy,test,winbox,password,web,sniff,sensitive,api,romon,dude,tikapp
add name=homeassistant policy=read,test,api,!local,!telnet,!ssh,!ftp,!reboot,!write,!policy,!winbox,!password,!web,!sniff,!sensitive,!romon,!dude,!tikapp
/caps-man manager
set enabled=yes upgrade-policy=suggest-same-version
/caps-man provisioning
add action=create-dynamic-enabled hw-supported-modes=gn master-configuration=cfg2G
add action=create-dynamic-enabled hw-supported-modes=an,ac master-configuration=cfg5G
/interface bridge port
add bridge=bridge comment=defconf interface=ether2
add bridge=bridge comment=defconf interface=ether3
add bridge=bridge comment=defconf interface=ether4
add bridge=bridge comment=defconf interface=ether5
add bridge=bridge comment=defconf interface=ether6
add bridge=bridge comment=defconf interface=ether7
add bridge=bridge comment=defconf interface=ether8
add bridge=bridge comment=defconf interface=ether9
add bridge=bridge comment=defconf interface=ether10
add bridge=bridge comment=defconf interface=sfp1
add bridge=bridge comment=defconf interface=wlan1
/ip neighbor discovery-settings
set discover-interface-list=LAN
/interface list member
add comment=defconf interface=bridge list=LAN
add comment=defconf interface=ether1 list=WAN
/interface wireless cap
#
set bridge=bridge caps-man-addresses=127.0.0.1 discovery-interfaces=bridge enabled=yes interfaces=wlan1
/ip address
add address=192.168.88.1/24 comment=defconf interface=ether2 network=192.168.88.0
add address=87.96.165.183/25 interface=ether1 network=87.96.165.128
/ip dhcp-client
add comment=defconf disabled=no interface=ether1
/ip dhcp-server lease
add address=192.168.88.11 mac-address=00:17:88:A6:88:5D server=DhcpWithScript
add address=192.168.88.12 comment="Xiomi Desk Lamp" mac-address=F0:B4:29:C5:6D:71 server=DhcpWithScript
add address=192.168.88.13 client-id=1:c4:ad:34:e4:39:3c mac-address=C4:AD:34:E4:39:3C server=DhcpWithScript
add address=192.168.88.10 client-id=1:b8:27:eb:5d:10:2b comment="Hassio - old" disabled=yes mac-address=B8:27:EB:5D:10:2B server=DhcpWithScript
add address=192.168.88.15 client-id=1:8:66:98:8b:46:dd comment=AppleTV mac-address=08:66:98:8B:46:DD server=DhcpWithScript
add address=192.168.88.16 client-id=1:c0:d2:dd:79:4f:39 comment=Android-dashboard mac-address=C0:D2:DD:79:4F:39 server=DhcpWithScript
add address=192.168.88.14 client-id=1:48:8f:5a:6d:0:83 mac-address=48:8F:5A:6D:00:83 server=DhcpWithScript
add address=192.168.88.9 comment="Ikea Tradfri gateway" mac-address=58:D5:0A:B3:A7:A3 server=DhcpWithScript
add address=192.168.88.17 comment="Broadlink remote" mac-address=24:DF:A7:7A:8E:51 server=DhcpWithScript
add address=192.168.88.8 client-id=1:b8:27:eb:c0:ef:3f comment=Pihole mac-address=B8:27:EB:C0:EF:3F server=DhcpWithScript
add address=192.168.88.41 comment="Big Nest speaker" mac-address=14:C1:4E:32:3D:7F server=DhcpWithScript
add address=192.168.88.31 mac-address=44:07:0B:42:0C:B6 server=DhcpWithScript
add address=192.168.88.10 client-id=1:dc:a6:32:76:ee:a7 comment=HomeAssistant mac-address=DC:A6:32:76:EE:A7 server=DhcpWithScript
add address=192.168.88.18 client-id=1:90:2b:34:5f:4a:51 comment="Next Cloud server" mac-address=90:2B:34:5F:4A:51 server=DhcpWithScript
/ip dhcp-server network
add address=192.168.88.0/24 comment=defconf dns-server=192.168.88.8 domain=local gateway=192.168.88.1
/ip dns
set allow-remote-requests=yes
/ip dns static
add address=192.168.88.1 comment=defconf name=router.lan
add address=192.168.88.34 comment=DhcpWithScript-3C:71:BF:F0:B3:78 name=192-168-88-34.local ttl=15m
add address=192.168.88.17 comment=DhcpWithScript-24:DF:A7:7A:8E:51 name=rm3-7a-8e-51--.local ttl=15m
add address=192.168.88.13 comment=DhcpWithScript-C4:AD:34:E4:39:3C name=mikrotik-cap-ap-living-room.local ttl=15m
add address=192.168.88.14 comment=DhcpWithScript-48:8F:5A:6D:00:83 name=mikrotik-cap-ap-hallway.local ttl=15m
add address=192.168.88.11 comment=DhcpWithScript-00:17:88:A6:88:5D name=philips-hue.local ttl=15m
add address=192.168.88.15 comment=DhcpWithScript-08:66:98:8B:46:DD name=family-room.local ttl=15m
add address=192.168.88.23 comment=DhcpWithScript-50:D4:F7:5E:BB:B6 name=hs100.local ttl=15m
add address=192.168.88.9 comment=DhcpWithScript-58:D5:0A:B3:A7:A3 name=gw-58d50ab3a7a3.local ttl=15m
add address=192.168.88.18 comment=DhcpWithScript-90:2B:34:5F:4A:51 name=nextcloud.local ttl=15m
add address=192.168.88.24 comment=DhcpWithScript-50:D4:F7:5E:BF:6B name=hs100.local ttl=15m
add address=192.168.88.41 comment=DhcpWithScript-14:C1:4E:32:3D:7F name=nest-audio.local ttl=15m
add address=192.168.88.26 comment=DhcpWithScript-F0:EF:86:07:F5:7F name=google-nest-mini.local ttl=15m
add address=192.168.88.33 comment=DhcpWithScript-E4:F0:42:56:FE:DF name=google-home-mini.local ttl=15m
add address=192.168.88.31 comment=DhcpWithScript-44:07:0B:42:0C:B6 name=google-home-mini.local ttl=15m
add address=192.168.88.30 comment=DhcpWithScript-78:4F:43:5D:63:E5 name=macs-mbp.local ttl=15m
add address=192.168.88.32 comment=DhcpWithScript-32:E2:15:4F:98:71 name=josef-s-s10.local ttl=15m
add address=192.168.88.28 comment=DhcpWithScript-BC:83:85:EE:CB:03 name=desktop-tdi4gvl.local ttl=15m
add address=192.168.88.19 comment=DhcpWithScript-A6:A6:CD:64:D9:9C name=ll.local ttl=15m
add address=192.168.88.45 comment=DhcpWithScript-A0:78:17:71:3F:86 name=macbook-pro-4.local ttl=15m
add address=192.168.88.10 comment=DhcpWithScript-DC:A6:32:76:EE:A7 name=homeassistant.local ttl=15m
add address=192.168.88.25 comment=DhcpWithScript-AE:82:F2:D7:81:2C name=ipad.local ttl=15m
/ip firewall filter
add action=accept chain=input comment="defconf: accept established,related,untracked" connection-state=established,related,untracked
add action=drop chain=input comment="defconf: drop invalid" connection-state=invalid
add action=accept chain=input comment="defconf: accept ICMP" protocol=icmp
add action=accept chain=input comment="defconf: accept to local loopback (for CAPsMAN)" dst-address=127.0.0.1
add action=drop chain=input comment="defconf: drop all not coming from LAN" in-interface-list=!LAN
add action=accept chain=forward comment="defconf: accept in ipsec policy" ipsec-policy=in,ipsec
add action=accept chain=forward comment="defconf: accept out ipsec policy" ipsec-policy=out,ipsec
add action=fasttrack-connection chain=forward comment="defconf: fasttrack" connection-state=established,related
add action=accept chain=forward comment="defconf: accept established,related, untracked" connection-state=established,related,untracked
add action=drop chain=forward comment="defconf: drop invalid" connection-state=invalid
add action=drop chain=forward comment="defconf: drop all from WAN not DSTNATed" connection-nat-state=!dstnat connection-state=new in-interface-list=WAN
/ip firewall nat
add action=masquerade chain=srcnat comment="defconf: masquerade" ipsec-policy=out,none out-interface-list=WAN
add action=dst-nat chain=dstnat comment="Nginx Proxy Manager " dst-port=80 in-interface=ether1 protocol=tcp to-addresses=192.168.88.10 to-ports=80
add action=dst-nat chain=dstnat comment="Nginx Proxy Manager " dst-port=443 in-interface=ether1 protocol=tcp to-addresses=192.168.88.10 to-ports=443
add action=dst-nat chain=dstnat comment="Hairpin DST - homeassistent" disabled=yes dst-port=443 in-interface=bridge protocol=tcp to-addresses=192.168.88.10 to-ports=443
add action=masquerade chain=srcnat comment="HAIRPIN SRC - test" dst-address=192.168.88.0 protocol=tcp src-address=192.168.88.0/24 to-addresses=192.168.88.10
add action=dst-nat chain=dstnat comment="Raspberry Pi Hassio" disabled=yes dst-port=8123 protocol=tcp to-addresses=192.168.88.10 to-ports=8123
add action=dst-nat chain=dstnat comment="Hairpin DST - nextcloud" disabled=yes dst-port=443 protocol=tcp to-addresses=192.168.88.10 to-ports=8124
add action=masquerade chain=srcnat comment="Hairpin SRC - nextcloud" disabled=yes dst-address=192.168.88.10 dst-port=8124 protocol=tcp src-address=192.168.88.0/24
add action=dst-nat chain=dstnat comment="Next Cloud server" disabled=yes dst-port=8222 in-interface=all-ethernet protocol=tcp to-addresses=192.168.88.18 to-ports=443
add action=dst-nat chain=dstnat comment="Mikrotik SSH" disabled=yes dst-port=795 in-interface=ether1 protocol=tcp to-addresses=192.168.88.1 to-ports=22
add action=dst-nat chain=dstnat comment="RPi SSH - 794" disabled=yes dst-port=794 in-interface=ether1 protocol=tcp to-addresses=192.168.88.10 to-ports=22
add action=dst-nat chain=dstnat comment="Next Cloud SSH - 793" disabled=yes dst-port=793 in-interface=ether1 protocol=tcp to-addresses=192.168.88.18 to-ports=22
add action=dst-nat chain=dstnat dst-address=87.96.165.183 dst-port=8123 protocol=tcp to-addresses=192.168.88.10 to-ports=8123
add action=dst-nat chain=dstnat dst-address=87.96.165.183 dst-port=80 protocol=tcp to-addresses=192.168.88.10 to-ports=80
add action=dst-nat chain=dstnat dst-address=87.96.165.183 dst-port=443 protocol=tcp to-addresses=192.168.88.10 to-ports=443
add action=dst-nat chain=dstnat dst-address=87.96.165.183 dst-port=8124 protocol=tcp to-addresses=192.168.88.10 to-ports=8124
/ip service
set www port=82
set www-ssl certificate=Webfig
/ip ssh
set always-allow-password-login=yes
/lcd interface pages
set 0 interfaces=wlan1
/system clock
set time-zone-name=Europe/Stockholm
/system identity
set name="MikroTik Hub"
/system routerboard settings
set auto-upgrade=yes cpu-frequency=700MHz silent-boot=yes
/tool mac-server
set allowed-interface-list=LAN
/tool mac-server mac-winbox
set allowed-interface-list=LAN